Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccne1Q61457 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ccne1Q61457 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccne1Q61457 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccne1Q61457 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ccne1Q61457 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccne1Q61457 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Ccne1Q61457 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ccne1Q61457 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ccne1Q61457 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ccne1Q61457 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ccne1Q61457 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.99■□□□□ 0.63
Ccne1Q61457 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC18.99■□□□□ 0.63
Ccne1Q61457 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Ccne1Q61457 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ccne1Q61457 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
Ccne1Q61457 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ccne1Q61457 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Ccne1Q61457 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ccne1Q61457 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Ccne1Q61457 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccne1Q61457 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccne1Q61457 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Ccne1Q61457 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccne1Q61457 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.98■□□□□ 0.63
Ccne1Q61457 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.98■□□□□ 0.63
Ccne1Q61457 Gm9908-201ENSMUST00000211534 448 ntBASIC18.98■□□□□ 0.63
Ccne1Q61457 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.98■□□□□ 0.63
Ccne1Q61457 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccne1Q61457 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
Ccne1Q61457 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ccne1Q61457 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ccne1Q61457 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.97■□□□□ 0.63
Ccne1Q61457 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.97■□□□□ 0.63
Ccne1Q61457 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.97■□□□□ 0.63
Ccne1Q61457 Gm28760-201ENSMUST00000185995 736 ntBASIC18.97■□□□□ 0.63
Ccne1Q61457 Gm28631-201ENSMUST00000190740 334 ntBASIC18.97■□□□□ 0.63
Ccne1Q61457 Gm18018-201ENSMUST00000198273 408 ntBASIC18.97■□□□□ 0.63
Ccne1Q61457 Gm45668-201ENSMUST00000211271 493 ntBASIC18.97■□□□□ 0.63
Ccne1Q61457 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccne1Q61457 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ccne1Q61457 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccne1Q61457 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.97■□□□□ 0.63
Ccne1Q61457 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Gm45667-201ENSMUST00000210380 1316 ntBASIC18.97■□□□□ 0.63
Ccne1Q61457 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccne1Q61457 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccne1Q61457 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccne1Q61457 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccne1Q61457 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccne1Q61457 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccne1Q61457 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccne1Q61457 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccne1Q61457 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccne1Q61457 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccne1Q61457 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms