Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.53□□□□□ -0.24
Clcn4Q61418 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Gm10499-201ENSMUST00000174094 934 ntBASIC13.53□□□□□ -0.24
Clcn4Q61418 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Gm2756-201ENSMUST00000195851 400 ntBASIC13.53□□□□□ -0.24
Clcn4Q61418 Gm9682-201ENSMUST00000197505 556 ntBASIC13.53□□□□□ -0.24
Clcn4Q61418 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.53□□□□□ -0.24
Clcn4Q61418 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Clcn4Q61418 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Clcn4Q61418 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.53□□□□□ -0.24
Clcn4Q61418 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clcn4Q61418 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.52□□□□□ -0.24
Clcn4Q61418 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Clcn4Q61418 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn4Q61418 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn4Q61418 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.52□□□□□ -0.24
Clcn4Q61418 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn4Q61418 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.52□□□□□ -0.24
Clcn4Q61418 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn4Q61418 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Clcn4Q61418 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn4Q61418 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.52□□□□□ -0.24
Clcn4Q61418 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn4Q61418 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.52□□□□□ -0.24
Clcn4Q61418 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn4Q61418 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Clcn4Q61418 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clcn4Q61418 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Gm9727-201ENSMUST00000161387 555 ntBASIC13.52□□□□□ -0.25
Clcn4Q61418 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.52□□□□□ -0.25
Clcn4Q61418 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.52□□□□□ -0.25
Clcn4Q61418 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Gm27628-201ENSMUST00000184911 107 ntBASIC13.52□□□□□ -0.25
Clcn4Q61418 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.52□□□□□ -0.25
Clcn4Q61418 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Clcn4Q61418 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.52□□□□□ -0.25
Clcn4Q61418 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Clcn4Q61418 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.52□□□□□ -0.25
Clcn4Q61418 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Clcn4Q61418 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.52□□□□□ -0.25
Clcn4Q61418 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clcn4Q61418 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.52□□□□□ -0.25
Clcn4Q61418 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.52□□□□□ -0.25
Clcn4Q61418 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Clcn4Q61418 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clcn4Q61418 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Clcn4Q61418 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.51□□□□□ -0.25
Clcn4Q61418 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.51□□□□□ -0.25
Clcn4Q61418 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clcn4Q61418 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms