Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.22■□□□□ 0.51
Irf9Q61179 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Irf9Q61179 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.21■□□□□ 0.51
Irf9Q61179 Gm45453-201ENSMUST00000211758 853 ntBASIC18.21■□□□□ 0.51
Irf9Q61179 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.21■□□□□ 0.51
Irf9Q61179 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.21■□□□□ 0.51
Irf9Q61179 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Irf9Q61179 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.21■□□□□ 0.51
Irf9Q61179 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.21■□□□□ 0.51
Irf9Q61179 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Irf9Q61179 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Irf9Q61179 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.21■□□□□ 0.51
Irf9Q61179 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Irf9Q61179 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Irf9Q61179 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Efs-202ENSMUST00000227037 2540 ntBASIC18.2■□□□□ 0.5
Irf9Q61179 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Irf9Q61179 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Irf9Q61179 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.2■□□□□ 0.5
Irf9Q61179 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Irf9Q61179 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.2■□□□□ 0.5
Irf9Q61179 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Irf9Q61179 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Irf9Q61179 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Irf9Q61179 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Irf9Q61179 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Irf9Q61179 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.19■□□□□ 0.5
Irf9Q61179 Gm15487-201ENSMUST00000122373 465 ntBASIC18.19■□□□□ 0.5
Irf9Q61179 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Mir6977-201ENSMUST00000184960 64 ntBASIC18.19■□□□□ 0.5
Irf9Q61179 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.19■□□□□ 0.5
Irf9Q61179 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Irf9Q61179 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Irf9Q61179 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.18■□□□□ 0.5
Irf9Q61179 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Irf9Q61179 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Irf9Q61179 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Irf9Q61179 Gm10275-202ENSMUST00000168697 495 ntBASIC18.18■□□□□ 0.5
Irf9Q61179 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC18.18■□□□□ 0.5
Irf9Q61179 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.18■□□□□ 0.5
Irf9Q61179 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Gm10275-201ENSMUST00000092620 635 ntBASIC18.18■□□□□ 0.5
Irf9Q61179 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.18■□□□□ 0.5
Irf9Q61179 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Irf9Q61179 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms