Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.6■□□□□ 0.41
Vps54Q5SPW0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps54Q5SPW0 Gm9824-201ENSMUST00000178707 561 ntBASIC17.6■□□□□ 0.41
Vps54Q5SPW0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.6■□□□□ 0.41
Vps54Q5SPW0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps54Q5SPW0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps54Q5SPW0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.6■□□□□ 0.41
Vps54Q5SPW0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps54Q5SPW0 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps54Q5SPW0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vps54Q5SPW0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps54Q5SPW0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps54Q5SPW0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Vps54Q5SPW0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps54Q5SPW0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Gm22175-201ENSMUST00000175007 78 ntBASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Gm18766-201ENSMUST00000189811 808 ntBASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Gm18049-201ENSMUST00000208909 581 ntBASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps54Q5SPW0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps54Q5SPW0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Mir6956-201ENSMUST00000183598 62 ntBASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Gm37277-201ENSMUST00000194052 1111 ntBASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vps54Q5SPW0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vps54Q5SPW0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms