Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Acot6-202ENSMUST00000222921 3622 ntBASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav15-1-dv6-1Q5R1D2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms