Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav8d-2Q5R1B6 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trav8d-2Q5R1B6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-2Q5R1B6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-2Q5R1B6 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-2Q5R1B6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-2Q5R1B6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8d-2Q5R1B6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Gm6244-201ENSMUST00000178732 841 ntBASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Gm27839-201ENSMUST00000184242 106 ntBASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Gm5425-201ENSMUST00000214125 459 ntBASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8d-2Q5R1B6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Gm12390-201ENSMUST00000117897 397 ntBASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Gm4804-201ENSMUST00000182234 999 ntBASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Gm45331-201ENSMUST00000209868 554 ntBASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav8d-2Q5R1B6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Gm21470-201ENSMUST00000187680 696 ntBASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Gm17795-201ENSMUST00000214505 757 ntBASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav8d-2Q5R1B6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms