Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scn2bQ56A07 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.51□□□□□ -0.09
Scn2bQ56A07 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Gm43514-201ENSMUST00000198852 424 ntBASIC14.51□□□□□ -0.09
Scn2bQ56A07 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn2bQ56A07 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.5□□□□□ -0.09
Scn2bQ56A07 Gm45167-201ENSMUST00000208007 322 ntBASIC14.5□□□□□ -0.09
Scn2bQ56A07 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Scn2bQ56A07 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.49□□□□□ -0.09
Scn2bQ56A07 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Gm4899-201ENSMUST00000178708 719 ntBASIC14.49□□□□□ -0.09
Scn2bQ56A07 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Gm27628-201ENSMUST00000184911 107 ntBASIC14.49□□□□□ -0.09
Scn2bQ56A07 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.49□□□□□ -0.09
Scn2bQ56A07 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.49□□□□□ -0.09
Scn2bQ56A07 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn2bQ56A07 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms