Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx49Q4FZF3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx49Q4FZF3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx49Q4FZF3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx49Q4FZF3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ddx49Q4FZF3 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.04■□□□□ 0.32
Ddx49Q4FZF3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Gm15653-201ENSMUST00000119247 907 ntBASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Gm9522-201ENSMUST00000182394 926 ntBASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx49Q4FZF3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Gm3436-201ENSMUST00000179930 840 ntBASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Gm44719-201ENSMUST00000206404 149 ntBASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Gm45668-201ENSMUST00000211271 493 ntBASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ddx49Q4FZF3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx49Q4FZF3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx49Q4FZF3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx49Q4FZF3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ddx49Q4FZF3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx49Q4FZF3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.31
Ddx49Q4FZF3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx49Q4FZF3 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx49Q4FZF3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx49Q4FZF3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx49Q4FZF3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ddx49Q4FZF3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 Gm15823-201ENSMUST00000064305 670 ntBASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17.01■□□□□ 0.31
Ddx49Q4FZF3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ddx49Q4FZF3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms