Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.93■□□□□ 0.46
Shank3Q4ACU6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.93■□□□□ 0.46
Shank3Q4ACU6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Gm9823-201ENSMUST00000051212 327 ntBASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.92■□□□□ 0.46
Shank3Q4ACU6 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Gm10012-201ENSMUST00000078252 192 ntBASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Olfr582-201ENSMUST00000098212 960 ntBASIC17.92■□□□□ 0.46
Shank3Q4ACU6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Shank3Q4ACU6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Carlr-201ENSMUST00000181515 2574 ntBASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Gm14723-201ENSMUST00000118686 215 ntBASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Mir497b-201ENSMUST00000093601 125 ntBASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Shank3Q4ACU6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Gm22018-201ENSMUST00000104357 131 ntBASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.9■□□□□ 0.46
Shank3Q4ACU6 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Shank3Q4ACU6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.89■□□□□ 0.46
Shank3Q4ACU6 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Shank3Q4ACU6 Gm13385-201ENSMUST00000121089 220 ntBASIC17.89■□□□□ 0.46
Shank3Q4ACU6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Shank3Q4ACU6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms