Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim40Q3UWA4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Gm18622-201ENSMUST00000219361 595 ntBASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim40Q3UWA4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.77□□□□□ -0.2
Trim40Q3UWA4 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim40Q3UWA4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim40Q3UWA4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.77□□□□□ -0.2
Trim40Q3UWA4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim40Q3UWA4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Gm27742-201ENSMUST00000184667 60 ntBASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim40Q3UWA4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.76□□□□□ -0.21
Trim40Q3UWA4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Olfr129-201ENSMUST00000122318 993 ntBASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Acot6-202ENSMUST00000222921 3622 ntBASIC13.76□□□□□ -0.21
Trim40Q3UWA4 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim40Q3UWA4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim40Q3UWA4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms