Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm23958-201ENSMUST00000157207 105 ntBASIC12.18□□□□□ -0.46
Znf48Q3US17 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Znf48Q3US17 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.18□□□□□ -0.46
Znf48Q3US17 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.18□□□□□ -0.46
Znf48Q3US17 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.18□□□□□ -0.46
Znf48Q3US17 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Znf48Q3US17 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Znf48Q3US17 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Znf48Q3US17 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Znf48Q3US17 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Znf48Q3US17 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.17□□□□□ -0.46
Znf48Q3US17 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Znf48Q3US17 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Znf48Q3US17 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Znf48Q3US17 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Gm17968-201ENSMUST00000194902 784 ntBASIC12.17□□□□□ -0.46
Znf48Q3US17 Gm43438-201ENSMUST00000198133 379 ntBASIC12.17□□□□□ -0.46
Znf48Q3US17 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.17□□□□□ -0.46
Znf48Q3US17 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.17□□□□□ -0.46
Znf48Q3US17 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Znf48Q3US17 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.17□□□□□ -0.46
Znf48Q3US17 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.17□□□□□ -0.46
Znf48Q3US17 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Znf48Q3US17 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Znf48Q3US17 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.16□□□□□ -0.46
Znf48Q3US17 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Znf48Q3US17 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Znf48Q3US17 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.16□□□□□ -0.46
Znf48Q3US17 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Znf48Q3US17 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Znf48Q3US17 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.16□□□□□ -0.46
Znf48Q3US17 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.16□□□□□ -0.46
Znf48Q3US17 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Gm44335-201ENSMUST00000196879 141 ntBASIC12.16□□□□□ -0.46
Znf48Q3US17 Gm44297-201ENSMUST00000198304 141 ntBASIC12.16□□□□□ -0.46
Znf48Q3US17 Gm44346-201ENSMUST00000198851 141 ntBASIC12.16□□□□□ -0.46
Znf48Q3US17 Gm5312-201ENSMUST00000203728 547 ntBASIC12.16□□□□□ -0.46
Znf48Q3US17 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.16□□□□□ -0.46
Znf48Q3US17 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.16□□□□□ -0.46
Znf48Q3US17 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Znf48Q3US17 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Znf48Q3US17 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms