Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b2Q3UJB0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Gm8565-201ENSMUST00000183259 1014 ntBASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Gm3786-201ENSMUST00000202659 378 ntBASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Gm7287-201ENSMUST00000205267 602 ntBASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b2Q3UJB0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Gm42690-201ENSMUST00000197921 1836 ntBASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Gm8749-201ENSMUST00000117737 331 ntBASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Gm8801-201ENSMUST00000173255 1064 ntBASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Gm8463-201ENSMUST00000208573 613 ntBASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.8■□□□□ 0.6
Sf3b2Q3UJB0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Gm5370-201ENSMUST00000187187 574 ntBASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Gm29127-201ENSMUST00000188304 517 ntBASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 AC126253.1-201ENSMUST00000227974 824 ntBASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC18.79■□□□□ 0.6
Sf3b2Q3UJB0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Sf3b2Q3UJB0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms