Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.37□□□□□ -0.27
Spg11Q3UHA3 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Spg11Q3UHA3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Spg11Q3UHA3 Gm13689-201ENSMUST00000119360 685 ntBASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.35□□□□□ -0.27
Spg11Q3UHA3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Gm20482-202ENSMUST00000174729 825 ntBASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Gm37008-201ENSMUST00000195712 319 ntBASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.35□□□□□ -0.27
Spg11Q3UHA3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Spg11Q3UHA3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Spg11Q3UHA3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Spg11Q3UHA3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Spg11Q3UHA3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.34□□□□□ -0.27
Spg11Q3UHA3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Spg11Q3UHA3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Spg11Q3UHA3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms