Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Zscan30-202ENSMUST00000224144 1458 ntBASIC17.18■□□□□ 0.34
Col5a2Q3U962 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.18■□□□□ 0.34
Col5a2Q3U962 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Col5a2Q3U962 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.17■□□□□ 0.34
Col5a2Q3U962 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.17■□□□□ 0.34
Col5a2Q3U962 Gm15429-201ENSMUST00000151268 798 ntBASIC17.17■□□□□ 0.34
Col5a2Q3U962 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.17■□□□□ 0.34
Col5a2Q3U962 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.17■□□□□ 0.34
Col5a2Q3U962 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col5a2Q3U962 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.17■□□□□ 0.34
Col5a2Q3U962 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.17■□□□□ 0.34
Col5a2Q3U962 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.17■□□□□ 0.34
Col5a2Q3U962 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col5a2Q3U962 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.17■□□□□ 0.34
Col5a2Q3U962 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col5a2Q3U962 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col5a2Q3U962 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.16■□□□□ 0.34
Col5a2Q3U962 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Mir3102-201ENSMUST00000175555 104 ntBASIC17.16■□□□□ 0.34
Col5a2Q3U962 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col5a2Q3U962 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col5a2Q3U962 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Col5a2Q3U962 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms