Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim43aQ3TL54 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Gm18733-201ENSMUST00000173950 856 ntBASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim43aQ3TL54 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Gm6376-201ENSMUST00000209407 580 ntBASIC15.54■□□□□ 0.08
Trim43aQ3TL54 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.54■□□□□ 0.08
Trim43aQ3TL54 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim43aQ3TL54 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.54■□□□□ 0.08
Trim43aQ3TL54 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.53■□□□□ 0.08
Trim43aQ3TL54 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Gm44771-201ENSMUST00000206975 626 ntBASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.53■□□□□ 0.08
Trim43aQ3TL54 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trim43aQ3TL54 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms