Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Ush2AQ2QI47 Gm28265-201ENSMUST00000188201 2319 ntBASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gm13316-201ENSMUST00000140537 691 ntBASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gm44967-201ENSMUST00000207047 631 ntBASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gm10782-202ENSMUST00000223775 1480 ntBASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 AC132901.1-201ENSMUST00000224345 508 ntBASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gm15131-201ENSMUST00000119124 595 ntBASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gm6722-201ENSMUST00000221586 390 ntBASIC7.61□□□□□ -1.19
Ush2AQ2QI47 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Ush2AQ2QI47 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm7541-201ENSMUST00000118361 535 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm38210-201ENSMUST00000191944 809 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 AC131330.1-201ENSMUST00000227814 1015 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm3283-201ENSMUST00000199319 1350 ntBASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC7.6□□□□□ -1.19
Ush2AQ2QI47 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms