Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chrna5Q2MKA5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chrna5Q2MKA5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chrna5Q2MKA5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Chrna5Q2MKA5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Chrna5Q2MKA5 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.33■□□□□ 0.37
Chrna5Q2MKA5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chrna5Q2MKA5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Gm4984-201ENSMUST00000115987 360 ntBASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.33■□□□□ 0.36
Chrna5Q2MKA5 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Mir1982-201ENSMUST00000157368 74 ntBASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Ighv1-25-201ENSMUST00000195638 345 ntBASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna5Q2MKA5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Mir7654-201ENSMUST00000185082 70 ntBASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna5Q2MKA5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna5Q2MKA5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms