Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.22□□□□□ -0.45
Tff1Q08423 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.22□□□□□ -0.45
Tff1Q08423 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Tff1Q08423 Gm6550-201ENSMUST00000187574 993 ntBASIC12.22□□□□□ -0.45
Tff1Q08423 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.22□□□□□ -0.45
Tff1Q08423 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.22□□□□□ -0.45
Tff1Q08423 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.22□□□□□ -0.45
Tff1Q08423 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tff1Q08423 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Tff1Q08423 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Tff1Q08423 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Tff1Q08423 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.22□□□□□ -0.45
Tff1Q08423 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Tff1Q08423 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.21□□□□□ -0.45
Tff1Q08423 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.21□□□□□ -0.45
Tff1Q08423 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Tff1Q08423 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Tff1Q08423 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.21□□□□□ -0.45
Tff1Q08423 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.21□□□□□ -0.45
Tff1Q08423 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.21□□□□□ -0.45
Tff1Q08423 Gm9727-201ENSMUST00000161387 555 ntBASIC12.21□□□□□ -0.45
Tff1Q08423 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.21□□□□□ -0.45
Tff1Q08423 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.21□□□□□ -0.45
Tff1Q08423 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Tff1Q08423 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tff1Q08423 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tff1Q08423 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tff1Q08423 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Tff1Q08423 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tff1Q08423 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tff1Q08423 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tff1Q08423 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tff1Q08423 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tff1Q08423 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.21□□□□□ -0.46
Tff1Q08423 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tff1Q08423 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tff1Q08423 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tff1Q08423 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tff1Q08423 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.2□□□□□ -0.46
Tff1Q08423 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Tff1Q08423 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Gm4995-201ENSMUST00000117247 432 ntBASIC12.2□□□□□ -0.46
Tff1Q08423 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.2□□□□□ -0.46
Tff1Q08423 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.2□□□□□ -0.46
Tff1Q08423 Gm11780-201ENSMUST00000136880 516 ntBASIC12.2□□□□□ -0.46
Tff1Q08423 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.2□□□□□ -0.46
Tff1Q08423 Gm26308-201ENSMUST00000157768 69 ntBASIC12.2□□□□□ -0.46
Tff1Q08423 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.2□□□□□ -0.46
Tff1Q08423 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.2□□□□□ -0.46
Tff1Q08423 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.2□□□□□ -0.46
Tff1Q08423 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Tff1Q08423 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Tff1Q08423 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Tff1Q08423 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tff1Q08423 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tff1Q08423 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms