Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.42□□□□□ -0.1
Sox4Q06831 Gm18737-201ENSMUST00000173594 937 ntBASIC14.42□□□□□ -0.1
Sox4Q06831 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Gm5312-201ENSMUST00000203728 547 ntBASIC14.42□□□□□ -0.1
Sox4Q06831 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.42□□□□□ -0.1
Sox4Q06831 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sox4Q06831 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sox4Q06831 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sox4Q06831 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sox4Q06831 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.41□□□□□ -0.1
Sox4Q06831 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox4Q06831 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.41□□□□□ -0.1
Sox4Q06831 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Sox4Q06831 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox4Q06831 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Gm38225-201ENSMUST00000194001 393 ntBASIC14.41□□□□□ -0.1
Sox4Q06831 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Sox4Q06831 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.41□□□□□ -0.1
Sox4Q06831 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sox4Q06831 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox4Q06831 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox4Q06831 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox4Q06831 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox4Q06831 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox4Q06831 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox4Q06831 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.4□□□□□ -0.1
Sox4Q06831 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.4□□□□□ -0.1
Sox4Q06831 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.4□□□□□ -0.1
Sox4Q06831 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.4□□□□□ -0.1
Sox4Q06831 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Gm45098-201ENSMUST00000207179 657 ntBASIC14.4□□□□□ -0.1
Sox4Q06831 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.4□□□□□ -0.1
Sox4Q06831 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox4Q06831 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox4Q06831 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox4Q06831 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Sox4Q06831 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sox4Q06831 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Sox4Q06831 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox4Q06831 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms