Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.54□□□□□ -0.24
Col10a1Q05306 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Col10a1Q05306 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col10a1Q05306 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col10a1Q05306 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Col10a1Q05306 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col10a1Q05306 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col10a1Q05306 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col10a1Q05306 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.54□□□□□ -0.24
Col10a1Q05306 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col10a1Q05306 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col10a1Q05306 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.53□□□□□ -0.24
Col10a1Q05306 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Col10a1Q05306 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.53□□□□□ -0.24
Col10a1Q05306 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.53□□□□□ -0.24
Col10a1Q05306 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col10a1Q05306 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col10a1Q05306 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.53□□□□□ -0.24
Col10a1Q05306 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.53□□□□□ -0.24
Col10a1Q05306 Gm15483-201ENSMUST00000120338 456 ntBASIC13.53□□□□□ -0.24
Col10a1Q05306 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.53□□□□□ -0.24
Col10a1Q05306 Gm45612-201ENSMUST00000211320 160 ntBASIC13.53□□□□□ -0.24
Col10a1Q05306 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col10a1Q05306 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.53□□□□□ -0.24
Col10a1Q05306 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.53□□□□□ -0.24
Col10a1Q05306 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.53□□□□□ -0.24
Col10a1Q05306 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Col10a1Q05306 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.53□□□□□ -0.24
Col10a1Q05306 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col10a1Q05306 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col10a1Q05306 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col10a1Q05306 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Col10a1Q05306 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col10a1Q05306 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col10a1Q05306 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col10a1Q05306 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col10a1Q05306 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col10a1Q05306 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col10a1Q05306 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Col10a1Q05306 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col10a1Q05306 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col10a1Q05306 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.52□□□□□ -0.24
Col10a1Q05306 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col10a1Q05306 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Gm13464-201ENSMUST00000119418 935 ntBASIC13.52□□□□□ -0.25
Col10a1Q05306 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.52□□□□□ -0.25
Col10a1Q05306 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.52□□□□□ -0.25
Col10a1Q05306 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.52□□□□□ -0.25
Col10a1Q05306 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.52□□□□□ -0.25
Col10a1Q05306 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.52□□□□□ -0.25
Col10a1Q05306 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.52□□□□□ -0.25
Col10a1Q05306 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.52□□□□□ -0.25
Col10a1Q05306 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col10a1Q05306 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col10a1Q05306 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Col10a1Q05306 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col10a1Q05306 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Col10a1Q05306 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Col10a1Q05306 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col10a1Q05306 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Col10a1Q05306 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col10a1Q05306 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms