Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.61■□□□□ 0.25
GabpaQ00422 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC16.61■□□□□ 0.25
GabpaQ00422 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.61■□□□□ 0.25
GabpaQ00422 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Gm45453-201ENSMUST00000211758 853 ntBASIC16.61■□□□□ 0.25
GabpaQ00422 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GabpaQ00422 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GabpaQ00422 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GabpaQ00422 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.6■□□□□ 0.25
GabpaQ00422 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.6■□□□□ 0.25
GabpaQ00422 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC16.6■□□□□ 0.25
GabpaQ00422 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.6■□□□□ 0.25
GabpaQ00422 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.6■□□□□ 0.25
GabpaQ00422 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.6■□□□□ 0.25
GabpaQ00422 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
GabpaQ00422 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
GabpaQ00422 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.59■□□□□ 0.25
GabpaQ00422 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.59■□□□□ 0.25
GabpaQ00422 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Gm7488-201ENSMUST00000117148 684 ntBASIC16.59■□□□□ 0.25
GabpaQ00422 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.59■□□□□ 0.25
GabpaQ00422 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.59■□□□□ 0.25
GabpaQ00422 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.59■□□□□ 0.25
GabpaQ00422 Gm16215-201ENSMUST00000161990 637 ntBASIC16.59■□□□□ 0.25
GabpaQ00422 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.59■□□□□ 0.25
GabpaQ00422 Gm24694-201ENSMUST00000180054 110 ntBASIC16.59■□□□□ 0.25
GabpaQ00422 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.59■□□□□ 0.25
GabpaQ00422 Gm27663-201ENSMUST00000184839 110 ntBASIC16.59■□□□□ 0.25
GabpaQ00422 Gm46209-201ENSMUST00000217912 553 ntBASIC16.59■□□□□ 0.25
GabpaQ00422 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.59■□□□□ 0.25
GabpaQ00422 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GabpaQ00422 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GabpaQ00422 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
GabpaQ00422 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GabpaQ00422 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
GabpaQ00422 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GabpaQ00422 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GabpaQ00422 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
GabpaQ00422 Gm29667-201ENSMUST00000190817 490 ntBASIC16.58■□□□□ 0.24
GabpaQ00422 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
GabpaQ00422 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.58■□□□□ 0.24
GabpaQ00422 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
GabpaQ00422 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
GabpaQ00422 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GabpaQ00422 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms