Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC20.51■□□□□ 0.87
Xrn1P97789 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Xrn1P97789 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC20.51■□□□□ 0.87
Xrn1P97789 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC20.51■□□□□ 0.87
Xrn1P97789 Mir8109-201ENSMUST00000184375 117 ntBASIC20.51■□□□□ 0.87
Xrn1P97789 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC20.51■□□□□ 0.87
Xrn1P97789 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC20.51■□□□□ 0.87
Xrn1P97789 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xrn1P97789 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Xrn1P97789 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Xrn1P97789 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xrn1P97789 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Xrn1P97789 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xrn1P97789 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC20.51■□□□□ 0.87
Xrn1P97789 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrn1P97789 Gm22018-201ENSMUST00000104357 131 ntBASIC20.5■□□□□ 0.87
Xrn1P97789 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Xrn1P97789 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC20.5■□□□□ 0.87
Xrn1P97789 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Xrn1P97789 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrn1P97789 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Xrn1P97789 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC20.5■□□□□ 0.87
Xrn1P97789 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrn1P97789 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrn1P97789 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Xrn1P97789 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrn1P97789 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrn1P97789 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC20.5■□□□□ 0.87
Xrn1P97789 Gm27572-201ENSMUST00000183702 255 ntBASIC20.5■□□□□ 0.87
Xrn1P97789 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xrn1P97789 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Xrn1P97789 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Xrn1P97789 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Xrn1P97789 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC20.49■□□□□ 0.87
Xrn1P97789 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC20.49■□□□□ 0.87
Xrn1P97789 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC20.49■□□□□ 0.87
Xrn1P97789 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC20.49■□□□□ 0.87
Xrn1P97789 Gm18473-201ENSMUST00000220543 868 ntBASIC20.49■□□□□ 0.87
Xrn1P97789 AC126253.1-201ENSMUST00000227974 824 ntBASIC20.49■□□□□ 0.87
Xrn1P97789 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC20.49■□□□□ 0.87
Xrn1P97789 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Xrn1P97789 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Xrn1P97789 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Xrn1P97789 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Xrn1P97789 Gm14730-201ENSMUST00000122378 1045 ntBASIC20.48■□□□□ 0.87
Xrn1P97789 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC20.48■□□□□ 0.87
Xrn1P97789 Gm6152-201ENSMUST00000151704 340 ntBASIC20.48■□□□□ 0.87
Xrn1P97789 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xrn1P97789 Gm27772-201ENSMUST00000184900 187 ntBASIC20.48■□□□□ 0.87
Xrn1P97789 Gm7498-201ENSMUST00000203282 1084 ntBASIC20.48■□□□□ 0.87
Xrn1P97789 Gm9299-201ENSMUST00000206392 1140 ntBASIC20.48■□□□□ 0.87
Xrn1P97789 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC20.48■□□□□ 0.87
Xrn1P97789 Gm9823-201ENSMUST00000051212 327 ntBASIC20.48■□□□□ 0.87
Xrn1P97789 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Xrn1P97789 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xrn1P97789 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Xrn1P97789 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Xrn1P97789 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xrn1P97789 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Xrn1P97789 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xrn1P97789 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Xrn1P97789 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.47■□□□□ 0.87
Xrn1P97789 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC20.47■□□□□ 0.87
Xrn1P97789 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Xrn1P97789 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xrn1P97789 Gm42632-201ENSMUST00000201707 2411 ntBASIC20.47■□□□□ 0.87
Xrn1P97789 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Xrn1P97789 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Xrn1P97789 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Xrn1P97789 Gm7553-201ENSMUST00000185805 1426 ntBASIC20.47■□□□□ 0.87
Xrn1P97789 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Xrn1P97789 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Xrn1P97789 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xrn1P97789 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xrn1P97789 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Xrn1P97789 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xrn1P97789 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Xrn1P97789 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC20.47■□□□□ 0.87
Xrn1P97789 AC166997.1-201ENSMUST00000225122 572 ntBASIC20.47■□□□□ 0.87
Xrn1P97789 Carlr-201ENSMUST00000181515 2574 ntBASIC20.47■□□□□ 0.87
Xrn1P97789 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xrn1P97789 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Xrn1P97789 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Xrn1P97789 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Xrn1P97789 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Xrn1P97789 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Xrn1P97789 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms