Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Thumpd3P97770 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Thumpd3P97770 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Thumpd3P97770 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Thumpd3P97770 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.95□□□□□ -0.02
Thumpd3P97770 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.95□□□□□ -0.02
Thumpd3P97770 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.95□□□□□ -0.02
Thumpd3P97770 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.95□□□□□ -0.02
Thumpd3P97770 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.95□□□□□ -0.02
Thumpd3P97770 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Thumpd3P97770 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.95□□□□□ -0.02
Thumpd3P97770 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Thumpd3P97770 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Gm14140-201ENSMUST00000119999 995 ntBASIC14.94□□□□□ -0.02
Thumpd3P97770 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.94□□□□□ -0.02
Thumpd3P97770 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.94□□□□□ -0.02
Thumpd3P97770 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Thumpd3P97770 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Thumpd3P97770 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Gm15358-201ENSMUST00000119249 520 ntBASIC14.93□□□□□ -0.02
Thumpd3P97770 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.93□□□□□ -0.02
Thumpd3P97770 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Thumpd3P97770 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Thumpd3P97770 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms