Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
PrkdcP97313 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
PrkdcP97313 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
PrkdcP97313 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC9.8□□□□□ -0.84
PrkdcP97313 Gm12241-201ENSMUST00000118330 726 ntBASIC9.8□□□□□ -0.84
PrkdcP97313 Gm6152-201ENSMUST00000151704 340 ntBASIC9.8□□□□□ -0.84
PrkdcP97313 Gm45186-201ENSMUST00000206874 478 ntBASIC9.8□□□□□ -0.84
PrkdcP97313 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Mir433-201ENSMUST00000093564 124 ntBASIC9.8□□□□□ -0.84
PrkdcP97313 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
PrkdcP97313 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
PrkdcP97313 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.79□□□□□ -0.84
PrkdcP97313 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.79□□□□□ -0.84
PrkdcP97313 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
PrkdcP97313 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC9.79□□□□□ -0.84
PrkdcP97313 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC9.79□□□□□ -0.84
PrkdcP97313 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Gm6407-201ENSMUST00000176468 549 ntBASIC9.79□□□□□ -0.84
PrkdcP97313 Gm5051-201ENSMUST00000204085 485 ntBASIC9.79□□□□□ -0.84
PrkdcP97313 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC9.79□□□□□ -0.84
PrkdcP97313 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
PrkdcP97313 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
PrkdcP97313 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.78□□□□□ -0.84
PrkdcP97313 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.78□□□□□ -0.84
PrkdcP97313 Gm7046-201ENSMUST00000221351 977 ntBASIC9.78□□□□□ -0.84
PrkdcP97313 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC9.78□□□□□ -0.84
PrkdcP97313 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.78□□□□□ -0.84
PrkdcP97313 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.78□□□□□ -0.84
PrkdcP97313 Gm25732-201ENSMUST00000175168 60 ntBASIC9.78□□□□□ -0.84
PrkdcP97313 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
PrkdcP97313 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
PrkdcP97313 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
PrkdcP97313 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
PrkdcP97313 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.77□□□□□ -0.84
PrkdcP97313 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
PrkdcP97313 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.77□□□□□ -0.84
PrkdcP97313 Gm43830-201ENSMUST00000198760 1067 ntBASIC9.77□□□□□ -0.84
PrkdcP97313 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
PrkdcP97313 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
PrkdcP97313 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.77□□□□□ -0.85
PrkdcP97313 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
PrkdcP97313 Gm13369-201ENSMUST00000119442 987 ntBASIC9.77□□□□□ -0.85
PrkdcP97313 Gm12566-201ENSMUST00000121479 359 ntBASIC9.77□□□□□ -0.85
PrkdcP97313 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms