Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim43bP86448 Gm27628-201ENSMUST00000184911 107 ntBASIC15.1■□□□□ 0.01
Trim43bP86448 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.1■□□□□ 0.01
Trim43bP86448 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim43bP86448 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim43bP86448 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim43bP86448 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim43bP86448 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.1■□□□□ 0.01
Trim43bP86448 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim43bP86448 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Trim43bP86448 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim43bP86448 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim43bP86448 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim43bP86448 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Trim43bP86448 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Gm15467-201ENSMUST00000120582 445 ntBASIC15.09■□□□□ 0.01
Trim43bP86448 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Trim43bP86448 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim43bP86448 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.09■□□□□ 0.01
Trim43bP86448 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim43bP86448 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim43bP86448 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim43bP86448 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim43bP86448 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim43bP86448 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trim43bP86448 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim43bP86448 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim43bP86448 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim43bP86448 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trim43bP86448 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.08■□□□□ 0
Trim43bP86448 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.08■□□□□ 0
Trim43bP86448 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.08■□□□□ 0
Trim43bP86448 Gm9727-201ENSMUST00000161387 555 ntBASIC15.08■□□□□ 0
Trim43bP86448 Gm37935-201ENSMUST00000192012 982 ntBASIC15.08■□□□□ 0
Trim43bP86448 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.08■□□□□ 0
Trim43bP86448 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.08■□□□□ 0
Trim43bP86448 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.08■□□□□ 0
Trim43bP86448 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.08■□□□□ 0
Trim43bP86448 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.08■□□□□ 0
Trim43bP86448 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.08■□□□□ 0
Trim43bP86448 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim43bP86448 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.07■□□□□ 0
Trim43bP86448 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trim43bP86448 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.07■□□□□ 0
Trim43bP86448 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43bP86448 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43bP86448 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.07■□□□□ 0
Trim43bP86448 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43bP86448 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim43bP86448 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim43bP86448 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.07■□□□□ 0
Trim43bP86448 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim43bP86448 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim43bP86448 Gm18489-201ENSMUST00000172565 551 ntBASIC15.07■□□□□ 0
Trim43bP86448 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.07■□□□□ 0
Trim43bP86448 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.07■□□□□ 0
Trim43bP86448 Gm7787-201ENSMUST00000216858 688 ntBASIC15.07■□□□□ 0
Trim43bP86448 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms