Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SgcaP82350 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SgcaP82350 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.31□□□□□ -0.44
SgcaP82350 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SgcaP82350 Gm6433-201ENSMUST00000118634 875 ntBASIC12.31□□□□□ -0.44
SgcaP82350 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.31□□□□□ -0.44
SgcaP82350 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.31□□□□□ -0.44
SgcaP82350 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SgcaP82350 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SgcaP82350 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SgcaP82350 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.31□□□□□ -0.44
SgcaP82350 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.31□□□□□ -0.44
SgcaP82350 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SgcaP82350 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.31□□□□□ -0.44
SgcaP82350 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
SgcaP82350 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.3□□□□□ -0.44
SgcaP82350 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SgcaP82350 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
SgcaP82350 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SgcaP82350 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.3□□□□□ -0.44
SgcaP82350 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Gm9172-201ENSMUST00000212092 954 ntBASIC12.3□□□□□ -0.44
SgcaP82350 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.3□□□□□ -0.44
SgcaP82350 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SgcaP82350 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.3□□□□□ -0.44
SgcaP82350 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.3□□□□□ -0.44
SgcaP82350 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SgcaP82350 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SgcaP82350 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.29□□□□□ -0.44
SgcaP82350 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.29□□□□□ -0.44
SgcaP82350 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.29□□□□□ -0.44
SgcaP82350 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SgcaP82350 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.29□□□□□ -0.44
SgcaP82350 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.29□□□□□ -0.44
SgcaP82350 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SgcaP82350 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.29□□□□□ -0.44
SgcaP82350 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms