Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SgcbP82349 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.08□□□□□ -0.32
SgcbP82349 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SgcbP82349 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SgcbP82349 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SgcbP82349 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SgcbP82349 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.07□□□□□ -0.32
SgcbP82349 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Gm18889-201ENSMUST00000174284 929 ntBASIC13.07□□□□□ -0.32
SgcbP82349 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.07□□□□□ -0.32
SgcbP82349 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.07□□□□□ -0.32
SgcbP82349 Gm44335-201ENSMUST00000196879 141 ntBASIC13.07□□□□□ -0.32
SgcbP82349 Gm44297-201ENSMUST00000198304 141 ntBASIC13.07□□□□□ -0.32
SgcbP82349 Gm44346-201ENSMUST00000198851 141 ntBASIC13.07□□□□□ -0.32
SgcbP82349 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.07□□□□□ -0.32
SgcbP82349 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SgcbP82349 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SgcbP82349 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SgcbP82349 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SgcbP82349 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.07□□□□□ -0.32
SgcbP82349 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SgcbP82349 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
SgcbP82349 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SgcbP82349 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SgcbP82349 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SgcbP82349 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
SgcbP82349 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Gm14701-201ENSMUST00000117156 348 ntBASIC13.06□□□□□ -0.32
SgcbP82349 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.06□□□□□ -0.32
SgcbP82349 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.06□□□□□ -0.32
SgcbP82349 Gm15483-201ENSMUST00000120338 456 ntBASIC13.06□□□□□ -0.32
SgcbP82349 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.06□□□□□ -0.32
SgcbP82349 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SgcbP82349 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.06□□□□□ -0.32
SgcbP82349 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.06□□□□□ -0.32
SgcbP82349 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SgcbP82349 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SgcbP82349 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SgcbP82349 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
SgcbP82349 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SgcbP82349 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
SgcbP82349 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SgcbP82349 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.05□□□□□ -0.32
SgcbP82349 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.05□□□□□ -0.32
SgcbP82349 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.05□□□□□ -0.32
SgcbP82349 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.05□□□□□ -0.32
SgcbP82349 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms