Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.22□□□□□ -0.45
Pdlim4P70271 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.22□□□□□ -0.45
Pdlim4P70271 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pdlim4P70271 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pdlim4P70271 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pdlim4P70271 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.21□□□□□ -0.45
Pdlim4P70271 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.21□□□□□ -0.45
Pdlim4P70271 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.21□□□□□ -0.45
Pdlim4P70271 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.21□□□□□ -0.45
Pdlim4P70271 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.21□□□□□ -0.45
Pdlim4P70271 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.21□□□□□ -0.45
Pdlim4P70271 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.21□□□□□ -0.45
Pdlim4P70271 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.21□□□□□ -0.45
Pdlim4P70271 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.21□□□□□ -0.45
Pdlim4P70271 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.21□□□□□ -0.45
Pdlim4P70271 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pdlim4P70271 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pdlim4P70271 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.21□□□□□ -0.45
Pdlim4P70271 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pdlim4P70271 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pdlim4P70271 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.21□□□□□ -0.45
Pdlim4P70271 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Pdlim4P70271 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim4P70271 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim4P70271 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim4P70271 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim4P70271 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim4P70271 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim4P70271 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pdlim4P70271 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.2□□□□□ -0.46
Pdlim4P70271 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.2□□□□□ -0.46
Pdlim4P70271 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.2□□□□□ -0.46
Pdlim4P70271 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.2□□□□□ -0.46
Pdlim4P70271 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.2□□□□□ -0.46
Pdlim4P70271 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.2□□□□□ -0.46
Pdlim4P70271 Gm17968-201ENSMUST00000194902 784 ntBASIC12.2□□□□□ -0.46
Pdlim4P70271 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Gm45747-201ENSMUST00000212203 999 ntBASIC12.2□□□□□ -0.46
Pdlim4P70271 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.2□□□□□ -0.46
Pdlim4P70271 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.2□□□□□ -0.46
Pdlim4P70271 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pdlim4P70271 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pdlim4P70271 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pdlim4P70271 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pdlim4P70271 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pdlim4P70271 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pdlim4P70271 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms