Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Gm27300-201ENSMUST00000184085 97 ntBASIC16.14■□□□□ 0.17
Hmgb1P63158 Gm27335-201ENSMUST00000184758 97 ntBASIC16.14■□□□□ 0.17
Hmgb1P63158 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.14■□□□□ 0.17
Hmgb1P63158 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hmgb1P63158 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.14■□□□□ 0.17
Hmgb1P63158 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.14■□□□□ 0.17
Hmgb1P63158 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Hmgb1P63158 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hmgb1P63158 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb1P63158 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Mir5126-201ENSMUST00000175513 77 ntBASIC16.13■□□□□ 0.17
Hmgb1P63158 Gm9726-201ENSMUST00000180321 678 ntBASIC16.13■□□□□ 0.17
Hmgb1P63158 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb1P63158 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
Hmgb1P63158 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hmgb1P63158 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hmgb1P63158 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.12■□□□□ 0.17
Hmgb1P63158 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Hmgb1P63158 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Gm13464-201ENSMUST00000119418 935 ntBASIC16.12■□□□□ 0.17
Hmgb1P63158 Gm27628-201ENSMUST00000184911 107 ntBASIC16.12■□□□□ 0.17
Hmgb1P63158 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.12■□□□□ 0.17
Hmgb1P63158 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Hmgb1P63158 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hmgb1P63158 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hmgb1P63158 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Hmgb1P63158 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Hmgb1P63158 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgb1P63158 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgb1P63158 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgb1P63158 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgb1P63158 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.11■□□□□ 0.17
Hmgb1P63158 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgb1P63158 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgb1P63158 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgb1P63158 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgb1P63158 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.11■□□□□ 0.17
Hmgb1P63158 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgb1P63158 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.11■□□□□ 0.17
Hmgb1P63158 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgb1P63158 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.11■□□□□ 0.17
Hmgb1P63158 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hmgb1P63158 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms