Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm3P62311 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm3P62311 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.39□□□□□ -0.27
Lsm3P62311 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Lsm3P62311 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Lsm3P62311 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.39□□□□□ -0.27
Lsm3P62311 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Lsm3P62311 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.38□□□□□ -0.27
Lsm3P62311 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Lsm3P62311 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lsm3P62311 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm8825-201ENSMUST00000182565 998 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm4518-201ENSMUST00000182638 718 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lsm3P62311 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.38□□□□□ -0.27
Lsm3P62311 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lsm3P62311 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.38□□□□□ -0.27
Lsm3P62311 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lsm3P62311 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.38□□□□□ -0.27
Lsm3P62311 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lsm3P62311 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Lsm3P62311 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lsm3P62311 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.37□□□□□ -0.27
Lsm3P62311 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Lsm3P62311 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lsm3P62311 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.37□□□□□ -0.27
Lsm3P62311 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.37□□□□□ -0.27
Lsm3P62311 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.37□□□□□ -0.27
Lsm3P62311 Gm15039-201ENSMUST00000118914 875 ntBASIC13.37□□□□□ -0.27
Lsm3P62311 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Lsm3P62311 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lsm3P62311 Gm9987-201ENSMUST00000069768 567 ntBASIC13.37□□□□□ -0.27
Lsm3P62311 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lsm3P62311 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lsm3P62311 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Lsm3P62311 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lsm3P62311 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms