Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Gm9229-201ENSMUST00000222777 126 ntBASIC11.82□□□□□ -0.52
Lmo4P61969 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.82□□□□□ -0.52
Lmo4P61969 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Gm10275-201ENSMUST00000092620 635 ntBASIC11.82□□□□□ -0.52
Lmo4P61969 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.82□□□□□ -0.52
Lmo4P61969 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lmo4P61969 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lmo4P61969 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lmo4P61969 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Lmo4P61969 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Lmo4P61969 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lmo4P61969 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Lmo4P61969 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lmo4P61969 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.81□□□□□ -0.52
Lmo4P61969 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.81□□□□□ -0.52
Lmo4P61969 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Lmo4P61969 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lmo4P61969 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.81□□□□□ -0.52
Lmo4P61969 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.81□□□□□ -0.52
Lmo4P61969 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.81□□□□□ -0.52
Lmo4P61969 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.81□□□□□ -0.52
Lmo4P61969 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.81□□□□□ -0.52
Lmo4P61969 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lmo4P61969 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Lmo4P61969 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 BC001981-202ENSMUST00000191393 1545 ntBASIC11.81□□□□□ -0.52
Lmo4P61969 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lmo4P61969 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lmo4P61969 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lmo4P61969 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Sybu-209ENSMUST00000228639 4113 ntBASIC11.8□□□□□ -0.52
Lmo4P61969 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.8□□□□□ -0.52
Lmo4P61969 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Gm11424-201ENSMUST00000121929 829 ntBASIC11.8□□□□□ -0.52
Lmo4P61969 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.8□□□□□ -0.52
Lmo4P61969 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.8□□□□□ -0.52
Lmo4P61969 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.8□□□□□ -0.52
Lmo4P61969 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.8□□□□□ -0.52
Lmo4P61969 Gm6218-201ENSMUST00000219812 628 ntBASIC11.8□□□□□ -0.52
Lmo4P61969 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lmo4P61969 Gm20445-201ENSMUST00000061905 565 ntBASIC11.8□□□□□ -0.52
Lmo4P61969 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lmo4P61969 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lmo4P61969 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms