Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Sec61a1P61620 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Sec61a1P61620 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.94□□□□□ -0.34
Sec61a1P61620 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.94□□□□□ -0.34
Sec61a1P61620 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.94□□□□□ -0.34
Sec61a1P61620 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.94□□□□□ -0.34
Sec61a1P61620 AV026068-213ENSMUST00000223675 1171 ntBASIC12.94□□□□□ -0.34
Sec61a1P61620 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sec61a1P61620 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sec61a1P61620 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sec61a1P61620 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.93□□□□□ -0.34
Sec61a1P61620 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Gm7222-201ENSMUST00000117512 906 ntBASIC12.93□□□□□ -0.34
Sec61a1P61620 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.93□□□□□ -0.34
Sec61a1P61620 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.93□□□□□ -0.34
Sec61a1P61620 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.93□□□□□ -0.34
Sec61a1P61620 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.93□□□□□ -0.34
Sec61a1P61620 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.93□□□□□ -0.34
Sec61a1P61620 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.93□□□□□ -0.34
Sec61a1P61620 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sec61a1P61620 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.93□□□□□ -0.34
Sec61a1P61620 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sec61a1P61620 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.92□□□□□ -0.34
Sec61a1P61620 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sec61a1P61620 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sec61a1P61620 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Sec61a1P61620 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.92□□□□□ -0.34
Sec61a1P61620 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sec61a1P61620 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.92□□□□□ -0.34
Sec61a1P61620 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sec61a1P61620 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.92□□□□□ -0.34
Sec61a1P61620 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.92□□□□□ -0.34
Sec61a1P61620 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.92□□□□□ -0.34
Sec61a1P61620 Gm5364-201ENSMUST00000216789 889 ntBASIC12.92□□□□□ -0.34
Sec61a1P61620 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sec61a1P61620 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms