Protein–RNA interactions for Protein: P56389

Cda, Cytidine deaminase, mousemouse

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CdaP56389 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CdaP56389 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CdaP56389 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CdaP56389 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CdaP56389 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.15□□□□□ -0.3
CdaP56389 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.15□□□□□ -0.3
CdaP56389 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CdaP56389 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.15□□□□□ -0.3
CdaP56389 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CdaP56389 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.15□□□□□ -0.3
CdaP56389 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.15□□□□□ -0.3
CdaP56389 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.15□□□□□ -0.3
CdaP56389 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.15□□□□□ -0.3
CdaP56389 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.15□□□□□ -0.3
CdaP56389 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CdaP56389 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.15□□□□□ -0.3
CdaP56389 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CdaP56389 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
CdaP56389 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.15□□□□□ -0.31
CdaP56389 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.15□□□□□ -0.31
CdaP56389 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CdaP56389 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.14□□□□□ -0.31
CdaP56389 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CdaP56389 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CdaP56389 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.14□□□□□ -0.31
CdaP56389 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.14□□□□□ -0.31
CdaP56389 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.14□□□□□ -0.31
CdaP56389 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Gm27300-201ENSMUST00000184085 97 ntBASIC13.14□□□□□ -0.31
CdaP56389 Gm27335-201ENSMUST00000184758 97 ntBASIC13.14□□□□□ -0.31
CdaP56389 Gm27628-201ENSMUST00000184911 107 ntBASIC13.14□□□□□ -0.31
CdaP56389 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.14□□□□□ -0.31
CdaP56389 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.14□□□□□ -0.31
CdaP56389 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.14□□□□□ -0.31
CdaP56389 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CdaP56389 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CdaP56389 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.14□□□□□ -0.31
CdaP56389 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
CdaP56389 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CdaP56389 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CdaP56389 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.14□□□□□ -0.31
CdaP56389 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CdaP56389 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.13□□□□□ -0.31
CdaP56389 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CdaP56389 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.13□□□□□ -0.31
CdaP56389 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CdaP56389 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.13□□□□□ -0.31
CdaP56389 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.13□□□□□ -0.31
CdaP56389 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CdaP56389 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.13□□□□□ -0.31
CdaP56389 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.13□□□□□ -0.31
CdaP56389 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms