Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Gm18733-201ENSMUST00000173950 856 ntBASIC14.67□□□□□ -0.06
Fdft1P53798 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.67□□□□□ -0.06
Fdft1P53798 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.67□□□□□ -0.06
Fdft1P53798 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Fdft1P53798 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.67□□□□□ -0.06
Fdft1P53798 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.67□□□□□ -0.06
Fdft1P53798 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.67□□□□□ -0.06
Fdft1P53798 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fdft1P53798 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.66□□□□□ -0.06
Fdft1P53798 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.66□□□□□ -0.06
Fdft1P53798 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.66□□□□□ -0.06
Fdft1P53798 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Fdft1P53798 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.66□□□□□ -0.06
Fdft1P53798 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.66□□□□□ -0.06
Fdft1P53798 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Fdft1P53798 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Fdft1P53798 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.66□□□□□ -0.06
Fdft1P53798 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.66□□□□□ -0.06
Fdft1P53798 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.66□□□□□ -0.06
Fdft1P53798 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.66□□□□□ -0.06
Fdft1P53798 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Fdft1P53798 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Fdft1P53798 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Fdft1P53798 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fdft1P53798 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.65□□□□□ -0.06
Fdft1P53798 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.65□□□□□ -0.06
Fdft1P53798 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Fdft1P53798 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.65□□□□□ -0.06
Fdft1P53798 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.65□□□□□ -0.06
Fdft1P53798 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.65□□□□□ -0.06
Fdft1P53798 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Fdft1P53798 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.65□□□□□ -0.06
Fdft1P53798 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Fdft1P53798 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Fdft1P53798 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fdft1P53798 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Fdft1P53798 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Fdft1P53798 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fdft1P53798 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms