Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm12384-201ENSMUST00000119228 919 ntBASIC14.89□□□□□ -0.03
Sox1P53783 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.89□□□□□ -0.03
Sox1P53783 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox1P53783 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox1P53783 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox1P53783 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.89□□□□□ -0.03
Sox1P53783 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.89□□□□□ -0.03
Sox1P53783 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Sox1P53783 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.89□□□□□ -0.03
Sox1P53783 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sox1P53783 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sox1P53783 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.89□□□□□ -0.03
Sox1P53783 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sox1P53783 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox1P53783 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.88□□□□□ -0.03
Sox1P53783 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox1P53783 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Gm15393-201ENSMUST00000120499 219 ntBASIC14.88□□□□□ -0.03
Sox1P53783 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.88□□□□□ -0.03
Sox1P53783 Gm22902-201ENSMUST00000158488 302 ntBASIC14.88□□□□□ -0.03
Sox1P53783 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sox1P53783 Gm27501-201ENSMUST00000183599 107 ntBASIC14.88□□□□□ -0.03
Sox1P53783 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.88□□□□□ -0.03
Sox1P53783 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.88□□□□□ -0.03
Sox1P53783 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.88□□□□□ -0.03
Sox1P53783 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox1P53783 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox1P53783 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sox1P53783 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sox1P53783 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.88□□□□□ -0.03
Sox1P53783 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Sox1P53783 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sox1P53783 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Gm43758-201ENSMUST00000199500 367 ntBASIC14.87□□□□□ -0.03
Sox1P53783 Mir433-201ENSMUST00000093564 124 ntBASIC14.87□□□□□ -0.03
Sox1P53783 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sox1P53783 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.87□□□□□ -0.03
Sox1P53783 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sox1P53783 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.86□□□□□ -0.03
Sox1P53783 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Sox1P53783 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sox1P53783 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.86□□□□□ -0.03
Sox1P53783 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sox1P53783 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.86□□□□□ -0.03
Sox1P53783 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sox1P53783 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms