Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pdx1P52946 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.5□□□□□ -0.09
Pdx1P52946 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.5□□□□□ -0.09
Pdx1P52946 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pdx1P52946 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pdx1P52946 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.5□□□□□ -0.09
Pdx1P52946 Gm24513-201ENSMUST00000174964 138 ntBASIC14.5□□□□□ -0.09
Pdx1P52946 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Gm27397-201ENSMUST00000184997 107 ntBASIC14.5□□□□□ -0.09
Pdx1P52946 Gm2213-201ENSMUST00000197485 688 ntBASIC14.5□□□□□ -0.09
Pdx1P52946 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.5□□□□□ -0.09
Pdx1P52946 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Pdx1P52946 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.5□□□□□ -0.09
Pdx1P52946 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pdx1P52946 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Pdx1P52946 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pdx1P52946 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pdx1P52946 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pdx1P52946 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pdx1P52946 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pdx1P52946 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.49□□□□□ -0.09
Pdx1P52946 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.49□□□□□ -0.09
Pdx1P52946 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
Pdx1P52946 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Gm27920-201ENSMUST00000183953 96 ntBASIC14.49□□□□□ -0.09
Pdx1P52946 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pdx1P52946 Gm27494-201ENSMUST00000184735 189 ntBASIC14.49□□□□□ -0.09
Pdx1P52946 Olfr286-202ENSMUST00000205305 969 ntBASIC14.49□□□□□ -0.09
Pdx1P52946 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.49□□□□□ -0.09
Pdx1P52946 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.49□□□□□ -0.09
Pdx1P52946 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.49□□□□□ -0.09
Pdx1P52946 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Pdx1P52946 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pdx1P52946 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.49□□□□□ -0.09
Pdx1P52946 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Pdx1P52946 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pdx1P52946 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pdx1P52946 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pdx1P52946 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.48□□□□□ -0.09
Pdx1P52946 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pdx1P52946 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pdx1P52946 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pdx1P52946 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Gm13365-201ENSMUST00000121188 973 ntBASIC14.48□□□□□ -0.09
Pdx1P52946 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Pdx1P52946 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pdx1P52946 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.48□□□□□ -0.09
Pdx1P52946 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pdx1P52946 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pdx1P52946 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pdx1P52946 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Pdx1P52946 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms