Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.18□□□□□ -0.46
Nkx2-1P50220 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Gm14859-201ENSMUST00000117752 357 ntBASIC12.18□□□□□ -0.46
Nkx2-1P50220 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Mir3081-201ENSMUST00000175305 84 ntBASIC12.18□□□□□ -0.46
Nkx2-1P50220 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Gm44454-201ENSMUST00000198541 138 ntBASIC12.18□□□□□ -0.46
Nkx2-1P50220 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-1P50220 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.17□□□□□ -0.46
Nkx2-1P50220 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Olfr129-201ENSMUST00000122318 993 ntBASIC12.17□□□□□ -0.46
Nkx2-1P50220 Gm7284-201ENSMUST00000131667 944 ntBASIC12.17□□□□□ -0.46
Nkx2-1P50220 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nkx2-1P50220 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.16□□□□□ -0.46
Nkx2-1P50220 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Gm7977-201ENSMUST00000193787 748 ntBASIC12.16□□□□□ -0.46
Nkx2-1P50220 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.16□□□□□ -0.46
Nkx2-1P50220 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-1P50220 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms