Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Rfx3P48381 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.26□□□□□ -0.29
Rfx3P48381 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.26□□□□□ -0.29
Rfx3P48381 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rfx3P48381 Gm44771-201ENSMUST00000206975 626 ntBASIC13.26□□□□□ -0.29
Rfx3P48381 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.26□□□□□ -0.29
Rfx3P48381 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.26□□□□□ -0.29
Rfx3P48381 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
Rfx3P48381 AV026068-213ENSMUST00000223675 1171 ntBASIC13.26□□□□□ -0.29
Rfx3P48381 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Rfx3P48381 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Rfx3P48381 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Rfx3P48381 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rfx3P48381 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Rfx3P48381 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Rfx3P48381 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Rfx3P48381 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Gm13884-201ENSMUST00000118103 829 ntBASIC13.25□□□□□ -0.29
Rfx3P48381 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.25□□□□□ -0.29
Rfx3P48381 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.25□□□□□ -0.29
Rfx3P48381 Gm18195-201ENSMUST00000207604 706 ntBASIC13.25□□□□□ -0.29
Rfx3P48381 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
Rfx3P48381 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rfx3P48381 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rfx3P48381 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rfx3P48381 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.24□□□□□ -0.29
Rfx3P48381 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rfx3P48381 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rfx3P48381 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.24□□□□□ -0.29
Rfx3P48381 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rfx3P48381 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.24□□□□□ -0.29
Rfx3P48381 Gm45167-201ENSMUST00000208007 322 ntBASIC13.24□□□□□ -0.29
Rfx3P48381 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.24□□□□□ -0.29
Rfx3P48381 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rfx3P48381 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rfx3P48381 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rfx3P48381 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Rfx3P48381 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rfx3P48381 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms