Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TgfaP48030 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TgfaP48030 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
TgfaP48030 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TgfaP48030 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.69□□□□□ -0.38
TgfaP48030 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TgfaP48030 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Gm15806-201ENSMUST00000120696 955 ntBASIC12.69□□□□□ -0.38
TgfaP48030 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TgfaP48030 Gm21854-201ENSMUST00000179901 471 ntBASIC12.69□□□□□ -0.38
TgfaP48030 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.69□□□□□ -0.38
TgfaP48030 Gm9182-201ENSMUST00000217829 639 ntBASIC12.69□□□□□ -0.38
TgfaP48030 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.69□□□□□ -0.38
TgfaP48030 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TgfaP48030 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TgfaP48030 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TgfaP48030 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TgfaP48030 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TgfaP48030 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
TgfaP48030 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TgfaP48030 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.68□□□□□ -0.38
TgfaP48030 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TgfaP48030 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.68□□□□□ -0.38
TgfaP48030 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.68□□□□□ -0.38
TgfaP48030 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.68□□□□□ -0.38
TgfaP48030 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.68□□□□□ -0.38
TgfaP48030 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.68□□□□□ -0.38
TgfaP48030 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TgfaP48030 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.68□□□□□ -0.38
TgfaP48030 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TgfaP48030 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.67□□□□□ -0.38
TgfaP48030 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TgfaP48030 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
TgfaP48030 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.67□□□□□ -0.38
TgfaP48030 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TgfaP48030 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.67□□□□□ -0.38
TgfaP48030 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.67□□□□□ -0.38
TgfaP48030 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TgfaP48030 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms