Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm18935-201ENSMUST00000212692 664 ntBASIC15.33■□□□□ 0.04
HttP42859 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
HttP42859 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HttP42859 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HttP42859 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HttP42859 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HttP42859 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HttP42859 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HttP42859 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HttP42859 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HttP42859 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HttP42859 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.32■□□□□ 0.04
HttP42859 Gm10275-202ENSMUST00000168697 495 ntBASIC15.32■□□□□ 0.04
HttP42859 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.32■□□□□ 0.04
HttP42859 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.32■□□□□ 0.04
HttP42859 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.32■□□□□ 0.04
HttP42859 Gm10275-201ENSMUST00000092620 635 ntBASIC15.32■□□□□ 0.04
HttP42859 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HttP42859 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
HttP42859 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.32■□□□□ 0.04
HttP42859 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.32■□□□□ 0.04
HttP42859 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Gm22334-201ENSMUST00000158070 133 ntBASIC15.32■□□□□ 0.04
HttP42859 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HttP42859 Gm5523-201ENSMUST00000180415 997 ntBASIC15.32■□□□□ 0.04
HttP42859 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HttP42859 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HttP42859 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
HttP42859 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.31■□□□□ 0.04
HttP42859 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.31■□□□□ 0.04
HttP42859 Gm42627-201ENSMUST00000197347 224 ntBASIC15.31■□□□□ 0.04
HttP42859 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HttP42859 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HttP42859 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.31■□□□□ 0.04
HttP42859 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.31■□□□□ 0.04
HttP42859 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.31■□□□□ 0.04
HttP42859 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HttP42859 Gm11658-201ENSMUST00000120913 1008 ntBASIC15.31■□□□□ 0.04
HttP42859 Gm13461-201ENSMUST00000120980 662 ntBASIC15.31■□□□□ 0.04
HttP42859 Gm4271-201ENSMUST00000174444 973 ntBASIC15.31■□□□□ 0.04
HttP42859 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HttP42859 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.31■□□□□ 0.04
HttP42859 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.31■□□□□ 0.04
HttP42859 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.31■□□□□ 0.04
HttP42859 Gm44608-201ENSMUST00000206827 855 ntBASIC15.31■□□□□ 0.04
HttP42859 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HttP42859 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.31■□□□□ 0.04
HttP42859 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HttP42859 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HttP42859 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.31■□□□□ 0.04
HttP42859 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Gm14381-201ENSMUST00000122105 414 ntBASIC15.3■□□□□ 0.04
HttP42859 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.3■□□□□ 0.04
HttP42859 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC15.3■□□□□ 0.04
HttP42859 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Gm8810-201ENSMUST00000172895 754 ntBASIC15.3■□□□□ 0.04
HttP42859 Gm16505-201ENSMUST00000179981 232 ntBASIC15.3■□□□□ 0.04
HttP42859 Gm21470-201ENSMUST00000187680 696 ntBASIC15.3■□□□□ 0.04
HttP42859 Gm44397-201ENSMUST00000195950 113 ntBASIC15.3■□□□□ 0.04
HttP42859 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HttP42859 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms