Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-2P42586 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-2P42586 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-2P42586 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-2P42586 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-2P42586 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-2P42586 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Nkx2-2P42586 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.43□□□□□ -0.26
Nkx2-2P42586 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.43□□□□□ -0.26
Nkx2-2P42586 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Gm14042-201ENSMUST00000120139 833 ntBASIC13.43□□□□□ -0.26
Nkx2-2P42586 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.43□□□□□ -0.26
Nkx2-2P42586 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Gm18057-201ENSMUST00000208220 503 ntBASIC13.43□□□□□ -0.26
Nkx2-2P42586 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.43□□□□□ -0.26
Nkx2-2P42586 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.43□□□□□ -0.26
Nkx2-2P42586 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkx2-2P42586 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.43□□□□□ -0.26
Nkx2-2P42586 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Nkx2-2P42586 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Gm18737-201ENSMUST00000173594 937 ntBASIC13.42□□□□□ -0.26
Nkx2-2P42586 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Nkx2-2P42586 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.42□□□□□ -0.26
Nkx2-2P42586 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkx2-2P42586 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-2P42586 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.41□□□□□ -0.26
Nkx2-2P42586 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms