Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.34□□□□□ -0.43
Mmp9P41245 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Mmp9P41245 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Mmp9P41245 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Mmp9P41245 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Mmp9P41245 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Mmp9P41245 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.33□□□□□ -0.44
Mmp9P41245 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.33□□□□□ -0.44
Mmp9P41245 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.33□□□□□ -0.44
Mmp9P41245 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm8825-201ENSMUST00000182565 998 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm4518-201ENSMUST00000182638 718 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.33□□□□□ -0.44
Mmp9P41245 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.33□□□□□ -0.44
Mmp9P41245 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.33□□□□□ -0.44
Mmp9P41245 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.33□□□□□ -0.44
Mmp9P41245 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.33□□□□□ -0.44
Mmp9P41245 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Mmp9P41245 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.33□□□□□ -0.44
Mmp9P41245 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Mmp9P41245 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.32□□□□□ -0.44
Mmp9P41245 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Mmp9P41245 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Mir770-201ENSMUST00000103252 94 ntBASIC12.32□□□□□ -0.44
Mmp9P41245 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.32□□□□□ -0.44
Mmp9P41245 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.32□□□□□ -0.44
Mmp9P41245 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Mmp9P41245 Gm45328-201ENSMUST00000210942 917 ntBASIC12.32□□□□□ -0.44
Mmp9P41245 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.32□□□□□ -0.44
Mmp9P41245 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Mmp9P41245 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Mmp9P41245 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.32□□□□□ -0.44
Mmp9P41245 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Mmp9P41245 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.32□□□□□ -0.44
Mmp9P41245 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Mmp9P41245 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Mmp9P41245 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Mmp9P41245 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Mmp9P41245 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms