Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Abca1P41233 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.22□□□□□ -0.45
Abca1P41233 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Abca1P41233 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Abca1P41233 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.22□□□□□ -0.45
Abca1P41233 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.22□□□□□ -0.45
Abca1P41233 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.22□□□□□ -0.45
Abca1P41233 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Abca1P41233 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Abca1P41233 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Gm6415-201ENSMUST00000118488 348 ntBASIC12.21□□□□□ -0.45
Abca1P41233 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Abca1P41233 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Abca1P41233 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.21□□□□□ -0.45
Abca1P41233 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.21□□□□□ -0.45
Abca1P41233 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.21□□□□□ -0.45
Abca1P41233 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Abca1P41233 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Abca1P41233 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abca1P41233 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
Abca1P41233 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abca1P41233 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abca1P41233 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abca1P41233 Gm7488-201ENSMUST00000117148 684 ntBASIC12.21□□□□□ -0.46
Abca1P41233 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.21□□□□□ -0.46
Abca1P41233 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.21□□□□□ -0.46
Abca1P41233 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Abca1P41233 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.21□□□□□ -0.46
Abca1P41233 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Abca1P41233 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Abca1P41233 Gm18049-201ENSMUST00000208909 581 ntBASIC12.21□□□□□ -0.46
Abca1P41233 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abca1P41233 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abca1P41233 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Abca1P41233 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Abca1P41233 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Abca1P41233 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.2□□□□□ -0.46
Abca1P41233 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Abca1P41233 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Gm6912-201ENSMUST00000117218 544 ntBASIC12.2□□□□□ -0.46
Abca1P41233 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Abca1P41233 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.2□□□□□ -0.46
Abca1P41233 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.2□□□□□ -0.46
Abca1P41233 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Abca1P41233 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Abca1P41233 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.2□□□□□ -0.46
Abca1P41233 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Abca1P41233 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.2□□□□□ -0.46
Abca1P41233 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Abca1P41233 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.2□□□□□ -0.46
Abca1P41233 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Abca1P41233 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Abca1P41233 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms