Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.21□□□□□ -0.13
TfamP40630 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TfamP40630 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TfamP40630 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TfamP40630 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
TfamP40630 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TfamP40630 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
TfamP40630 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.21□□□□□ -0.13
TfamP40630 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TfamP40630 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.21□□□□□ -0.13
TfamP40630 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TfamP40630 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TfamP40630 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TfamP40630 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
TfamP40630 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TfamP40630 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TfamP40630 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TfamP40630 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TfamP40630 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TfamP40630 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TfamP40630 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TfamP40630 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.2□□□□□ -0.14
TfamP40630 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TfamP40630 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.2□□□□□ -0.14
TfamP40630 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TfamP40630 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.2□□□□□ -0.14
TfamP40630 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.2□□□□□ -0.14
TfamP40630 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TfamP40630 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
TfamP40630 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TfamP40630 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TfamP40630 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.2□□□□□ -0.14
TfamP40630 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.2□□□□□ -0.14
TfamP40630 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TfamP40630 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
TfamP40630 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.19□□□□□ -0.14
TfamP40630 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.19□□□□□ -0.14
TfamP40630 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TfamP40630 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.19□□□□□ -0.14
TfamP40630 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.19□□□□□ -0.14
TfamP40630 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms