Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.58□□□□□ -0.24
Foxa1P35582 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxa1P35582 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Foxa1P35582 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.57□□□□□ -0.24
Foxa1P35582 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Foxa1P35582 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.57□□□□□ -0.24
Foxa1P35582 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.57□□□□□ -0.24
Foxa1P35582 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Foxa1P35582 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Foxa1P35582 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.57□□□□□ -0.24
Foxa1P35582 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.57□□□□□ -0.24
Foxa1P35582 Gm11745-201ENSMUST00000121669 448 ntBASIC13.57□□□□□ -0.24
Foxa1P35582 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.57□□□□□ -0.24
Foxa1P35582 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.57□□□□□ -0.24
Foxa1P35582 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.57□□□□□ -0.24
Foxa1P35582 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.57□□□□□ -0.24
Foxa1P35582 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.57□□□□□ -0.24
Foxa1P35582 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Foxa1P35582 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Foxa1P35582 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Foxa1P35582 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Foxa1P35582 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Foxa1P35582 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Foxa1P35582 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
Foxa1P35582 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.56□□□□□ -0.24
Foxa1P35582 Gm27494-201ENSMUST00000184735 189 ntBASIC13.56□□□□□ -0.24
Foxa1P35582 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.56□□□□□ -0.24
Foxa1P35582 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.56□□□□□ -0.24
Foxa1P35582 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Foxa1P35582 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Foxa1P35582 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa1P35582 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa1P35582 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Foxa1P35582 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Foxa1P35582 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Foxa1P35582 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.55□□□□□ -0.24
Foxa1P35582 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Foxa1P35582 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Foxa1P35582 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa1P35582 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Foxa1P35582 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa1P35582 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa1P35582 Gm27920-201ENSMUST00000183953 96 ntBASIC13.55□□□□□ -0.24
Foxa1P35582 Gm37935-201ENSMUST00000192012 982 ntBASIC13.55□□□□□ -0.24
Foxa1P35582 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.55□□□□□ -0.24
Foxa1P35582 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Foxa1P35582 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa1P35582 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Foxa1P35582 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa1P35582 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Foxa1P35582 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa1P35582 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.55□□□□□ -0.24
Foxa1P35582 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Foxa1P35582 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Foxa1P35582 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Foxa1P35582 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Foxa1P35582 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.54□□□□□ -0.24
Foxa1P35582 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms