Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Celf4-206ENSMUST00000224553 1729 ntBASIC12.64□□□□□ -0.39
Slc6a1P31648 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.64□□□□□ -0.39
Slc6a1P31648 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slc6a1P31648 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc6a1P31648 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Slc6a1P31648 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc6a1P31648 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Slc6a1P31648 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.63□□□□□ -0.39
Slc6a1P31648 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.63□□□□□ -0.39
Slc6a1P31648 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc6a1P31648 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Slc6a1P31648 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.63□□□□□ -0.39
Slc6a1P31648 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.63□□□□□ -0.39
Slc6a1P31648 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slc6a1P31648 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.62□□□□□ -0.39
Slc6a1P31648 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.62□□□□□ -0.39
Slc6a1P31648 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Birc2-201ENSMUST00000054878 378 ntBASIC12.62□□□□□ -0.39
Slc6a1P31648 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.62□□□□□ -0.39
Slc6a1P31648 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc6a1P31648 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Slc6a1P31648 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slc6a1P31648 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Slc6a1P31648 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms