Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxc11P31313 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc11P31313 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.23□□□□□ -0.13
Hoxc11P31313 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hoxc11P31313 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hoxc11P31313 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc11P31313 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc11P31313 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Hoxc11P31313 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxc11P31313 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc11P31313 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc11P31313 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc11P31313 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc11P31313 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc11P31313 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.22□□□□□ -0.13
Hoxc11P31313 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Gm11543-201ENSMUST00000120758 370 ntBASIC14.22□□□□□ -0.13
Hoxc11P31313 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.22□□□□□ -0.13
Hoxc11P31313 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxc11P31313 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxc11P31313 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Hoxc11P31313 Gm22175-201ENSMUST00000175007 78 ntBASIC14.22□□□□□ -0.13
Hoxc11P31313 Gm27430-201ENSMUST00000184585 107 ntBASIC14.22□□□□□ -0.13
Hoxc11P31313 Gm44333-201ENSMUST00000197168 107 ntBASIC14.22□□□□□ -0.13
Hoxc11P31313 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.22□□□□□ -0.13
Hoxc11P31313 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hoxc11P31313 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc11P31313 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc11P31313 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc11P31313 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hoxc11P31313 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hoxc11P31313 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Gm2810-201ENSMUST00000118681 990 ntBASIC14.21□□□□□ -0.13
Hoxc11P31313 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxc11P31313 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Hoxc11P31313 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Hoxc11P31313 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxc11P31313 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Hoxc11P31313 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Hoxc11P31313 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxc11P31313 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms