Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.79■□□□□ 0.28
Vcam1P29533 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.79■□□□□ 0.28
Vcam1P29533 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Vcam1P29533 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.79■□□□□ 0.28
Vcam1P29533 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.79■□□□□ 0.28
Vcam1P29533 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Vcam1P29533 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.79■□□□□ 0.28
Vcam1P29533 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.79■□□□□ 0.28
Vcam1P29533 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Vcam1P29533 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Vcam1P29533 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Vcam1P29533 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vcam1P29533 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Vcam1P29533 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Gm14928-201ENSMUST00000120198 477 ntBASIC16.78■□□□□ 0.28
Vcam1P29533 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.78■□□□□ 0.28
Vcam1P29533 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.78■□□□□ 0.28
Vcam1P29533 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Gm7653-201ENSMUST00000214567 508 ntBASIC16.78■□□□□ 0.28
Vcam1P29533 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Vcam1P29533 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.78■□□□□ 0.28
Vcam1P29533 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.78■□□□□ 0.28
Vcam1P29533 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Vcam1P29533 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Vcam1P29533 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.78■□□□□ 0.28
Vcam1P29533 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Vcam1P29533 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Vcam1P29533 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vcam1P29533 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Vcam1P29533 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Vcam1P29533 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Gm9794-201ENSMUST00000202370 423 ntBASIC16.77■□□□□ 0.28
Vcam1P29533 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.77■□□□□ 0.28
Vcam1P29533 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Vcam1P29533 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Vcam1P29533 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vcam1P29533 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vcam1P29533 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vcam1P29533 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vcam1P29533 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vcam1P29533 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vcam1P29533 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Vcam1P29533 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vcam1P29533 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Vcam1P29533 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vcam1P29533 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vcam1P29533 Carlr-201ENSMUST00000181515 2574 ntBASIC16.76■□□□□ 0.27
Vcam1P29533 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vcam1P29533 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Vcam1P29533 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Vcam1P29533 Gm12490-201ENSMUST00000120255 560 ntBASIC16.76■□□□□ 0.27
Vcam1P29533 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.76■□□□□ 0.27
Vcam1P29533 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Vcam1P29533 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Vcam1P29533 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.76■□□□□ 0.27
Vcam1P29533 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.76■□□□□ 0.27
Vcam1P29533 Gm33320-201ENSMUST00000192232 530 ntBASIC16.76■□□□□ 0.27
Vcam1P29533 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.76■□□□□ 0.27
Vcam1P29533 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms