Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.08□□□□□ -0.16
BdnfP21237 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
BdnfP21237 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.08□□□□□ -0.16
BdnfP21237 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
BdnfP21237 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.08□□□□□ -0.16
BdnfP21237 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.08□□□□□ -0.16
BdnfP21237 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.08□□□□□ -0.16
BdnfP21237 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BdnfP21237 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BdnfP21237 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
BdnfP21237 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
BdnfP21237 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
BdnfP21237 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC14.07□□□□□ -0.16
BdnfP21237 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.07□□□□□ -0.16
BdnfP21237 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.07□□□□□ -0.16
BdnfP21237 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
BdnfP21237 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BdnfP21237 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
BdnfP21237 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.06□□□□□ -0.16
BdnfP21237 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.06□□□□□ -0.16
BdnfP21237 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
BdnfP21237 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
BdnfP21237 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
BdnfP21237 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Gm15173-201ENSMUST00000122049 433 ntBASIC14.06□□□□□ -0.16
BdnfP21237 Gm11452-201ENSMUST00000122376 690 ntBASIC14.06□□□□□ -0.16
BdnfP21237 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BdnfP21237 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.06□□□□□ -0.16
BdnfP21237 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
BdnfP21237 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.06□□□□□ -0.16
BdnfP21237 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
BdnfP21237 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BdnfP21237 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.05□□□□□ -0.16
BdnfP21237 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BdnfP21237 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms