Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
TP20293 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.82□□□□□ -0.2
TP20293 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.82□□□□□ -0.2
TP20293 Mir8117-201ENSMUST00000184773 107 ntBASIC13.82□□□□□ -0.2
TP20293 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.82□□□□□ -0.2
TP20293 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.82□□□□□ -0.2
TP20293 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TP20293 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
TP20293 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.82□□□□□ -0.2
TP20293 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.82□□□□□ -0.2
TP20293 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TP20293 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.82□□□□□ -0.2
TP20293 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TP20293 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TP20293 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TP20293 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TP20293 Gm15467-201ENSMUST00000120582 445 ntBASIC13.81□□□□□ -0.2
TP20293 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.81□□□□□ -0.2
TP20293 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.81□□□□□ -0.2
TP20293 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.81□□□□□ -0.2
TP20293 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.81□□□□□ -0.2
TP20293 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TP20293 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.81□□□□□ -0.2
TP20293 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
TP20293 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.81□□□□□ -0.2
TP20293 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TP20293 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TP20293 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.8□□□□□ -0.2
TP20293 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
TP20293 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.8□□□□□ -0.2
TP20293 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TP20293 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TP20293 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Gm12260-201ENSMUST00000122447 411 ntBASIC13.8□□□□□ -0.2
TP20293 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.8□□□□□ -0.2
TP20293 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.8□□□□□ -0.2
TP20293 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.8□□□□□ -0.2
TP20293 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.8□□□□□ -0.2
TP20293 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.8□□□□□ -0.2
TP20293 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TP20293 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.8□□□□□ -0.2
TP20293 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.8□□□□□ -0.2
TP20293 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms